The detailed information of tRNA gene sequence


Sequence ID>ENV08001769
Genome IDABOF01027812
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 105
End posion on genome 30
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnaattat
tRNA gene sequence 
CGCGGGGTAGTGTAACCTGGAAGCACGCGGCGCTCATGACGCCGCAGTGAGGGTTCGAAT
CCCTCCCCCGCAACTA
Downstream region at tRNA end position 
ccgaacgccc
Secondary structure (Cloverleaf model)
>ENV08001769	Met	CAT
                   t      ACTA ccgaacgccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C A A        A      | | | | |     G
    C       T G T G       G A G G G     C
    T       + | | |                 T T
    G       G C A C
      G A A        G     CAGT
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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