The detailed information of tRNA gene sequence


Sequence ID>ENV08001771
Genome IDABOF01028959
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 9
End posion on genome 84
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
nntaccattt
tRNA gene sequence 
TGCTCCCTGGTGTAATTGGCAGCACAGTGGTTTCTGAGGCCATTAGGTCAAGGTTCGAGT
CCTTGGGGAGCAGCTA
Downstream region at tRNA end position 
ttggtggggt
Secondary structure (Cloverleaf model)
>ENV08001771	Gln	CTG
                   t      GCTA ttggtggggt
                     T - A
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G          T G
                    T     G T T C C     A
      T A A        G      | | | | |     G
    T       T G T G       C A A G G     C
    G       + | | |                 T T
    G       G C A C
      C A          A     TAGGT
                    G + T
                    T - A
                    G - C
                    G - C
                    T + G
                  T       G
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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