The detailed information of tRNA gene sequence


Sequence ID>ENV08001772
Genome IDABOF01033161
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 91
End posion on genome 16
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gccgactctt
tRNA gene sequence 
GGGGGCGTAGGCCAATGGAAGAGTCCGGTGGTTTAAGCCCACTGCGTGTTGCAGGTTCGA
ATCCTGCCGTCCCTACtc
Downstream region at tRNA end position 
acaaaagcca
Secondary structure (Cloverleaf model)
>ENV08001772	Leu	TAA
                   t      ACtc acaaaagcca
                     G + T
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C C G G       G C A G G     C
    G         | + |                 T T
    A       A G T C
      A G          C     GCGTGTT
                    G + T
                    G - C
                    T - A
                    G - C
                    G - C
                  T       C
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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