The detailed information of tRNA gene sequence


Sequence ID>ENV08001774
Genome IDABOF01033811
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 32
End posion on genome 108
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ggcgtgtcgT
tRNA gene sequence 
AGTCCCGTGGTGTAGCGGCCAAGCATATCGGCCTTTGGAGCCGAAGACCGCGGTTCGACT
CCGCGCGGGACTATCA
Downstream region at tRNA end position 
cgnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001774	Gln	TTG
                   T      ATCA cgnnnnnnnn
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     G C G C C     A
      C G A        G      | | | | |     G
    G       T G T G       C G C G G     C
    G       + | | +                 T T
    C       G C A T
      C A A        A     AGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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