The detailed information of tRNA gene sequence


Sequence ID>ENV08001775
Genome IDABOF01043917
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 22
End posion on genome 96
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cgtggcgaat
tRNA gene sequence 
GGCAAGGTAGCTCAGGGGTAGAGCGCCAGACTGAAAATTTGGGCGTCGGCGGTTCGATTC
CGCCCCTTGCCACCA
Downstream region at tRNA end position 
ttcccgattg
Secondary structure (Cloverleaf model)
>ENV08001775	Phe	GAA
                   t      ACCA ttcccgattg
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T T
                    T     C C G C C     A
        G A        A      | | | | |     G
      G     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     GCGTC
                    C - G
                    C - G
                    A - T
                    G + T
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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