The detailed information of tRNA gene sequence


Sequence ID>ENV08001776
Genome IDABOF01044963
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 11
End posion on genome 85
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ggcactattt
tRNA gene sequence 
TGCGGAGTAATTCAATGGCAGAATGTTGCGCTGTTAACGCAAACGTTACTGGTTCGAATC
CAGTCTCCGCAGCTA
Downstream region at tRNA end position 
tacggcgtgg
Secondary structure (Cloverleaf model)
>ENV08001776	Asn	GTT
                   t      GCTA tacggcgtgg
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G A C C     A
        A A        A      | | | | |     G
      T     C T T A       A C T G G     C
      G     | | | |                 T T
      G     G A A T
        C A        G     ACGTT
                    T - A
                    T - A
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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