The detailed information of tRNA gene sequence


Sequence ID>ENV08001777
Genome IDABOF01052157
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 105
End posion on genome 31
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
ACCCTTGGAGCATGACGGTGATGCAGCGGCTTCTAATTCCGACAGATGCGGGTTCAAATC
CCGTCAAGGGTACCA
Downstream region at tRNA end position 
aatacaatca
Secondary structure (Cloverleaf model)
>ENV08001777	Sup	CTA
                   t      ACCA aatacaatca
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    G     T G C C C     A
        A G        A      + | | | |     A
      C     T A C G       G C G G G     C
      G     | | | |                 T T
      G     A T G C
        T G        A     CAGAT
                    G   A
                    C - G
                    G - C
                    G - C
                    C   T
                  T       T
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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