The detailed information of tRNA gene sequence


Sequence ID>ENV08001782
Genome IDABOF01070933
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 21
End posion on genome 96
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctttgggcgT
tRNA gene sequence 
GGGCTCATAGCTCAGTGTGGCAGAGCACCTCCTTGGCTAGGAGGGGGCCCTGAGTTCAAA
TCTCAGTGAGTCCATag
Downstream region at tRNA end position 
ttttannnnn
Secondary structure (Cloverleaf model)
>ENV08001782	Ala	GGC
                   T      ATag ttttannnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     G A C T C     A
      T G A        A      | | | | |     A
    G       C T C G       C T G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       T
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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