The detailed information of tRNA gene sequence


Sequence ID>ENV08001783
Genome IDABOF01071665
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 95
End posion on genome 21
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nncacaacat
tRNA gene sequence 
CGCGGAGTAGACCAGTCTGGTAGGTCGTGAGGCTCATATCCTCAAGGTCGGCGGTTCGAA
TCCGCTCTCCGCAACat
Downstream region at tRNA end position 
caatgggtag
Secondary structure (Cloverleaf model)
>ENV08001783	Met	CAT
                   t      ACat caatgggtag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C G C C     A
      T G A        A      + | | | |     G
    C       C C A G       G G C G G     C
    T       | | | |                 T T
    G       G G T C
      G T A        G     AGGTC
                    T - A
                    G - C
                    A - T
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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