The detailed information of tRNA gene sequence


Sequence ID>ENV08001784
Genome IDABOF01082596
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 4
End posion on genome 79
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnnncca
tRNA gene sequence 
GATGGCGTAACTCAGCAGGTAGAGTGTCACGCTGAAAACGTGAAGGTCGTAGGTTCGATT
CCTACCGCCATCACTA
Downstream region at tRNA end position 
cattctgagg
Secondary structure (Cloverleaf model)
>ENV08001784	Phe	GAA
                   a      ACTA cattctgagg
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C A T C C     A
      C G A        A      | | | | |     G
    A       C T C A       G T A G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AGGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    G - C
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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