The detailed information of tRNA gene sequence


Sequence ID>ENV08001785
Genome IDABOF01087858
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 25
End posion on genome 100
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtgaattat
tRNA gene sequence 
CGCGGGGTAGTGTAACCTGGAAGCACGCGGCGCTCATGACGCCGCAGTGAGGGTTCGAAT
CCCTCCCCCGCAACTA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001785	Met	CAT
                   t      ACTA nnnnnnnnnn
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C A A        A      | | | | |     G
    C       T G T G       G A G G G     C
    T       + | | |                 T T
    G       G C A C
      G A A        G     CAGT
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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