The detailed information of tRNA gene sequence


Sequence ID>ENV08001786
Genome IDABOF01101687
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 96
End posion on genome 19
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GCTTGTGACGCACAATAGGAAGTGCGCCTCTCTTGTAAAGAGGAAATGTTGTGGGTTCGA
CTCCCACCACAAGCTTCA
Downstream region at tRNA end position 
acaatgagcc
Secondary structure (Cloverleaf model)
>ENV08001786	Thr	TGT
                   c      TTCA acaatgagcc
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C
                     T - A
                     G - C          T C
                    A     C A C C C     A
      T A A        C      | | | | |     G
    A       C A C G       G T G G G     C
    G       | | | |                 T T
    G       G T G C
      A A          G     AAATGTT
                    C - G
                    C - G
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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