The detailed information of tRNA gene sequence


Sequence ID>ENV08001789
Genome IDABOG01000218
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 86
End posion on genome 14
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctgcgtccac
tRNA gene sequence 
GGGACCGTGGGTTAGCCTGGTATACTTCGGGCCTTGGGTGCCCGTGACCCCGGTTCGAAT
CCGGGCGGTCCCAtcg
Downstream region at tRNA end position 
atcacccctc
Secondary structure (Cloverleaf model)
>ENV08001789	Pro	TGG
                   c      Atcg atcacccctc
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     G
    C       T T G G       C C C G G     C
    T         | | +                 T T
    G       T A C T
      G T A        T     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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