The detailed information of tRNA gene sequence


Sequence ID>ENV08001794
Genome IDABOG01000989
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 14
End posion on genome 87
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tctacggcgc
tRNA gene sequence 
GGCCCCATCGTATAGCGGCCTAGTACGCCGCCCTCTCACGGAGGTAACGCGGGTTCGAAT
CCCGCTGGGGTCACgg
Downstream region at tRNA end position 
tcgcaaaaaa
Secondary structure (Cloverleaf model)
>ENV08001794	Glu	CTC
                   c      ACgg tcgcaaaaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G C C C     A
      C G A        C      | | | | |     G
    G       T A T G       G C G G G     C
    G       + | | |                 T T
    C       G T A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G   A
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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