The detailed information of tRNA gene sequence


Sequence ID>ENV08001799
Genome IDABOG01002916
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 94
End posion on genome 19
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttctcactT
tRNA gene sequence 
AGGCCTATAGTTCAGTTGGTAAGAACAGTCCACTCATAATGGAAAAGTCGTAGGTTCAAA
TCCTACTAGGCCTAAaa
Downstream region at tRNA end position 
tataaaattt
Secondary structure (Cloverleaf model)
>ENV08001799	Met	CAT
                   T      AAaa tataaaattt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T T G       G T A G G     C
    G       | | | |                 T T
    G       G A A C
      T A A        A     AAGTC
                    G   A
                    T - A
                    C - G
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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