The detailed information of tRNA gene sequence


Sequence ID>ENV08001801
Genome IDABOG01004325
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 10
End posion on genome 83
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
natattcacc
tRNA gene sequence 
TCCGGTGTGGTGTAATGGTAACACAGGGGTCTCCAAAACCCTTAATGGCGGTTCGATTCC
GTCCACCGGGGCCA
Downstream region at tRNA end position 
aatacaattc
Secondary structure (Cloverleaf model)
>ENV08001801	Trp	CCA
                   c      GCCA aatacaattc
                     T + G
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C T G C C     A
        A A        G      | + | | |     G
      T     T G T G       G G C G G     C
      G     | | | |                 T T
      G     A C A C
        T A        A     TAAT
                    G + T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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