The detailed information of tRNA gene sequence


Sequence ID>ENV08001802
Genome IDABOG01004685
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 117
End posion on genome 45
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GCCTGGGTAGCTTAGCGGTAAAGCGCGTCCTTGGTAAGGACGAGACCGCGGGTTCAATTC
CCGCCCTAGGCTCtt
Downstream region at tRNA end position 
tctgctgtac
Secondary structure (Cloverleaf model)
>ENV08001802	Thr	GGT
                   t      TCtt tctgctgtac
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     G - C          T T
                    T     C G C C C     A
        G A        A      | | | | |     A
      C     T T C G       G C G G G     C
      G     | | | |                 T T
      G     A A G C
        T A        G     AGACC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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