The detailed information of tRNA gene sequence


Sequence ID>ENV08001803
Genome IDABOG01005087
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 34
End posion on genome 107
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acctccgctg
tRNA gene sequence 
GGGCGCGTAGCTCAGTCGGACAGAGCGTCGGACTTCTAATCCGACGGTCGCGGGTTCGAA
TCCCGTCGCGCCCGgtc
Downstream region at tRNA end position 
agaaggggnn
Secondary structure (Cloverleaf model)
>ENV08001803	Arg	TCT
                   g      Ggtc agaaggggnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        G     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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