The detailed information of tRNA gene sequence


Sequence ID>ENV08001804
Genome IDABOG01005116
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 16
End posion on genome 90
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cggaagacac
tRNA gene sequence 
GCTCGGTTGGTGTAGTCCGGCCAATCATCTTGGCCTTTCGAGCCGAGGACACGGGTTCGA
ATCCCGTACCGAGCAtcc
Downstream region at tRNA end position 
cgcgtgcgcg
Secondary structure (Cloverleaf model)
>ENV08001804	Glu	TTC
                   c      Atcc cgcgtgcgcg
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    C T G A        G      | | | | |     G
  C         T G T G       A C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        C     GGAC
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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