The detailed information of tRNA gene sequence


Sequence ID>ENV08001808
Genome IDABOG01008289
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 27
End posion on genome 101
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cggaagacac
tRNA gene sequence 
GCTCGGTTGGTGTAGTCCGGCCAATCATCTTGGCCTTTCGAGCCGAGGACACGGGTTCGA
ATCCCGTACCGAGCAtcc
Downstream region at tRNA end position 
cgcgtgtgcg
Secondary structure (Cloverleaf model)
>ENV08001808	Glu	TTC
                   c      Atcc cgcgtgtgcg
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    C T G A        G      | | | | |     G
  C         T G T G       A C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        C     GGAC
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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