The detailed information of tRNA gene sequence


Sequence ID>ENV08001809
Genome IDABOG01008337
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 20
End posion on genome 96
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cagccccgac
tRNA gene sequence 
GGACCGATAGCTCAGCTGGATAGAGTACCTGACTACGAATCAGGGGGTCGGGGGTTCGAA
TCCTCCTCGGTCCGCCA
Downstream region at tRNA end position 
cttcaaagtg
Secondary structure (Cloverleaf model)
>ENV08001809	Arg	ACG
                   c      GCCA cttcaaagtg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C C T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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