The detailed information of tRNA gene sequence


Sequence ID>WENV170000014
Genome IDAERA01000858
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 363
End posion on genome 287
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acgtggaaat
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGTTAGAGCGCCGCCCTGTCACGGCGGAGGCCGCGGGTTCAAG
TCCCGTCTCTCGCGCCA
Downstream region at tRNA end position 
ctttctcaaa
Secondary structure (Cloverleaf model)
>WENV170000014	Asp	GTC
                   t      GCCA ctttctcaaa
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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