The detailed information of tRNA gene sequence


Sequence ID>WENV170000034
Genome IDAERA01002166
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 7689
End posion on genome 7764
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctctaggtg
tRNA gene sequence 
GGGCCCGTAGCTCAATGGTTAGAGCTGGCGGCTCATAACCGTCTGGTTGCAGGTTCGAAT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
attctcttgc
Secondary structure (Cloverleaf model)
>WENV170000034	Met	CAT
                   g      ACCA attctcttgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     TGGTT
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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