The detailed information of tRNA gene sequence


Sequence ID>WENV170000042
Genome IDAERA01002210
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 190
End posion on genome 115
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aaagacatat
tRNA gene sequence
CGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAGT
CCTGCCCCCGCTACTA
Downstream region at tRNA end position
tccagatgca
Secondary structure (Cloverleaf model)
>WENV170000042	Met	CAT
                   t      ACTA tccagatgca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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