The detailed information of tRNA gene sequence


Sequence ID>WENV170000045
Genome IDAERA01002483
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 57
End posion on genome 132
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgggcgcaat
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGAGA
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tctgatgtgt
Secondary structure (Cloverleaf model)
>WENV170000045	Trp	CCA
                   t      GCCA tctgatgtgt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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