The detailed information of tRNA gene sequence


Sequence ID>WENV170000067
Genome IDAERA01005011
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 249
End posion on genome 173
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgctctgtt
tRNA gene sequence 
GGTGATGTAGCTCAGACGGTTAGAGCGATGGATTCATAACCCATAGGTCGGCGGTTCGAT
TCCGCCCATCACCACCA
Downstream region at tRNA end position 
acaaattctc
Secondary structure (Cloverleaf model)
>WENV170000067	Met	CAT
                   t      ACCA acaaattctc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     C C G C C     A
      A G A        A      | | | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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