The detailed information of tRNA gene sequence


Sequence ID>WENV170000070
Genome IDAERA01005387
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 305
End posion on genome 380
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cagaacacgt
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCACCCGCTTTGCAAGCGGGATGTCATCGGTTCGAGT
CCGATAGGCTCCACCA
Downstream region at tRNA end position 
aaacggttcg
Secondary structure (Cloverleaf model)
>WENV170000070	Ala	TGC
                   t      ACCA aaacggttcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          T G
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     ATGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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