The detailed information of tRNA gene sequence


Sequence ID>WENV170000086
Genome IDAERA01007578
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 373
End posion on genome 278
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcttaagctt
tRNA gene sequence 
GGGAGTGGCTGAGTCCCGGTGGGCTTTCCGGTCTTCAAAACCGGTGACGGGTCGCGTTGC
GGGCCGTGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
agaaacggct
Secondary structure (Cloverleaf model)
>WENV170000086	SeC(p)	TCA
                   t      GCCt agaaacggct
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    C     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | +                 T T
    T       G C T T
      G G          T     TGACGGGTCGCGTTGCGGGCCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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