The detailed information of tRNA gene sequence


Sequence ID>WENV170000087
Genome IDAERA01008104
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 359
End posion on genome 435
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
atttccggtc
tRNA gene sequence 
CGGAGTGTAGCGCAGCCCGGTAGCGCACTTGACTGGGGGTCAAGGGGTCGTGGGTTCGAA
TCCCGCCACTCCGACCA
Downstream region at tRNA end position 
tcaatccctt
Secondary structure (Cloverleaf model)
>WENV170000087	Pro	GGG
                   c      ACCA tcaatccctt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T G G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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