The detailed information of tRNA gene sequence


Sequence ID>WENV170000099
Genome IDAERA01011059
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 4235
End posion on genome 4160
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caatatttcc
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCTACAATGGCATTGTAGAGGTCAGGGGTTCGATT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
aataaaatca
Secondary structure (Cloverleaf model)
>WENV170000099	Ala	GGC
                   c      ACCA aataaaatca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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