The detailed information of tRNA gene sequence


Sequence ID>WENV170000112
Genome IDAERA01012174
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 14377
End posion on genome 14466
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataatcatcc
tRNA gene sequence 
GGTGAGGTGGGTGAGTGGCTTAAACCAACGGTTTGCTAAACCGTCGTACTCCGAAAGGGG
TACCGAGGGTTCGAATCCCTCCCTCACCGCtt
Downstream region at tRNA end position 
gaaagttttg
Secondary structure (Cloverleaf model)
>WENV170000112	Ser	GCT
                   c      GCtt gaaagttttg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACTCCGAAAGGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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