The detailed information of tRNA gene sequence


Sequence ID>WENV170000134
Genome IDAERA01015545
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 217
End posion on genome 143
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acaactgtcc
tRNA gene sequence 
GGATCGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCGGTCCGCtt
Downstream region at tRNA end position 
gaagcctcac
Secondary structure (Cloverleaf model)
>WENV170000134	Asp	GTC
                   c      GCtt gaagcctcac
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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