The detailed information of tRNA gene sequence


Sequence ID>WENV170000138
Genome IDAERA01015850
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 234
End posion on genome 323
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcgacacgca
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTAGCAGCAATGCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atgcggctgt
Secondary structure (Cloverleaf model)
>WENV170000138	Ser	CGA
                   a      GCCA atgcggctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTAGCAGCAATGCTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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