The detailed information of tRNA gene sequence


Sequence ID>WENV170000144
Genome IDAERA01016384
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 412
End posion on genome 486
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tggggcagca
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTCAGAGCGTACGGTTCACATCCGTGAGGTCGGGGGTTCGAG
CCCCTCATCGCCCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170000144	Val	CAC
                   a      ACnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T + G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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