The detailed information of tRNA gene sequence


Sequence ID>WENV170000162
Genome IDAERA01018682
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 656
End posion on genome 732
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position
cgggctccgc
tRNA gene sequence
GCGCCCGTAGCTCAGCTGGATAGAGTACTGCCCTCCGAAGGCAGGGGTCGGACGTTCGAA
TCGTCTCGGGCGCGCCA
Downstream region at tRNA end position
tatttttcaa
Secondary structure (Cloverleaf model)
>WENV170000162	Arg	CCG
                   c      GCCA tatttttcaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C T G C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A C G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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