The detailed information of tRNA gene sequence


Sequence ID>WENV170000172
Genome IDAERA01019310
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 2141
End posion on genome 2215
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ccctatgcgt
tRNA gene sequence 
TGGGGCGTCGTCTAATTGGCAGGACTCAGGCCTTTGGAGCCTGCTGTGGTGGTTCGAGTC
CACCCGCCCCAGCCA
Downstream region at tRNA end position 
ttaaatcgta
Secondary structure (Cloverleaf model)
>WENV170000172	Gln	TTG
                   t      GCCA ttaaatcgta
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C A C C     A
      T A A        C      | | | | |     G
    T       T C T G       G G T G G     C
    G       + | | |                 T T
    G       G G A C
      C A          T     CTGT
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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