The detailed information of tRNA gene sequence


Sequence ID>WENV170000176
Genome IDAERA01020128
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 1013
End posion on genome 1088
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
acaaatcggt
tRNA gene sequence 
TCCGGCGTAGCTCAGCTGGCAGAGCGGGTGACTGTTAATCACTAGGTCGGGGGTTCGAAT
CCCTCCGCCGGAGCCA
Downstream region at tRNA end position 
aaaatccatc
Secondary structure (Cloverleaf model)
>WENV170000176	Asn	GTT
                   t      GCCA aaaatccatc
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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