The detailed information of tRNA gene sequence


Sequence ID>WENV170000186
Genome IDAERA01021396
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 48
End posion on genome 123
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tcgggcctgc
tRNA gene sequence
GGGCCTTTAGCTCAACGGTTAGAGCAGAGGACTCATAATCCTTTGGTTGCGGGTTCGAAT
CCCGCAGGGCCCACCA
Downstream region at tRNA end position
atggaatccg
Secondary structure (Cloverleaf model)
>WENV170000186	Met	CAT
                   c      ACCA atggaatccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          T A
                    T     C G C C C     A
      C A A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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