The detailed information of tRNA gene sequence


Sequence ID>WENV170000198
Genome IDAERA01023121
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 143
End posion on genome 236
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
acccagatcc
tRNA gene sequence
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGCTAAGCGAGTATGGGGGCTTAAACC
TCCATCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170000198	Ser	GCT
                   c      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATGGGGGCTTAAACCTCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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