The detailed information of tRNA gene sequence


Sequence ID>WENV170000216
Genome IDAERA01026162
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 1471
End posion on genome 1560
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccaagatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTGTGCGTGAAAGCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cgtaacctat
Secondary structure (Cloverleaf model)
>WENV170000216	Ser	GGA
                   c      GCCA cgtaacctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGCGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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