The detailed information of tRNA gene sequence


Sequence ID>WENV170000227
Genome IDAERA01027920
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 837
End posion on genome 910
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaacggtcgt
tRNA gene sequence 
GGCGCGATGGCAGAGTGGTTATGCAGCGGCCTGCAAAGCCGTGTACCCCGGTTCGATTCC
GAGTCGCGCCTCCA
Downstream region at tRNA end position 
gtaacnnnnn
Secondary structure (Cloverleaf model)
>WENV170000227	Cys	GCA
                   t      TCCA gtaacnnnnn
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    T     G A G C C     A
        G A        G      |   | | |     G
      T     G A C G       C C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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