The detailed information of tRNA gene sequence


Sequence ID>WENV170000245
Genome IDAERA01033806
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 409
End posion on genome 335
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
attcagcgct
tRNA gene sequence
GGCGAGGTAGCTCAATGGTGGAGCAGTGGACTCATAAGCCATTGGATGTGGGTTCAAATC
CCACCCTCGCCACTA
Downstream region at tRNA end position
tttatttaaa
Secondary structure (Cloverleaf model)
>WENV170000245	Met	CAT
                   t      ACTA tttatttaaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
        A A        A      | | | | |     A
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     TGGAT
                    G + T
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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