The detailed information of tRNA gene sequence


Sequence ID>WENV170000260
Genome IDAERA01036251
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 57456
End posion on genome 57532
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ggatcacgtt
tRNA gene sequence
TGGTGCGTAGTTCAATTGGCTAGAATGACGGTCTCCAAAACCGTAGGCTATGGGTTCGAA
TCCCGTCGCACCAGCTA
Downstream region at tRNA end position
aataaatcta
Secondary structure (Cloverleaf model)
>WENV170000260	Trp	CCA
                   t      GCTA aataaatcta
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T A A        A      | + | | |     G
    T       C T T G       A T G G G     C
    G       | | | +                 T T
    G       G A A T
      C T A        G     AGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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