The detailed information of tRNA gene sequence


Sequence ID>ENV08001815
Genome IDABOG01012049
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 41
End posion on genome 113
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgagcactcg
tRNA gene sequence 
GGGCCCGTAGCTCAATGGTTAGAGCAGAGGACTCATAATCCTTTGGTTCCAGGTTCGAAT
CCTGGCGGGCCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001815	Met	CAT
                   g      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       C C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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