The detailed information of tRNA gene sequence


Sequence ID>WENV170000505
Genome IDAFSR01000007
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 6749
End posion on genome 6839
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatgcagacT
tRNA gene sequence 
GGAAGGGTGACAGAGTGGTTGATTGTGACGCTCTCGAAAAGCGTTGTGGCCGCAAGGTCA
CCGTGGGTTCGAATCCCACCCCTTCCGTCC
Downstream region at tRNA end position 
tcgatcaatc
Secondary structure (Cloverleaf model)
>WENV170000505	Ser	CGA
                   T      GTCC tcgatcaatc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C A       G T G G G     C
    G       + | | |                 T T
    T       T T G T
      T G A        G     TGTGGCCGCAAGGTCACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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