The detailed information of tRNA gene sequence


Sequence ID>WENV170000508
Genome IDAFSR01000025
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 3716
End posion on genome 3804
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gataggttcT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAAGCAGTCTTGAAAACTGTCGTGGCGCAAGCCACC
GTGGGTTCGAATCCCACCCTCTCCGTCA
Downstream region at tRNA end position 
aatcaagttt
Secondary structure (Cloverleaf model)
>WENV170000508	Ser	TGA
                   T      GTCA aatcaagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGTGGCGCAAGCCACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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