The detailed information of tRNA gene sequence


Sequence ID>WENV170000524
Genome IDAFSR01000058
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 39846
End posion on genome 39771
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgcagcgatT
tRNA gene sequence 
GGGGCTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
CCCCGTCAGCCCCGTac
Downstream region at tRNA end position 
tcttgagaac
Secondary structure (Cloverleaf model)
>WENV170000524	Asp	GTC
                   T      GTac tcttgagaac
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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