The detailed information of tRNA gene sequence


Sequence ID>WENV170000580
Genome IDAFSR01000560
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 14622
End posion on genome 14532
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggacaacac
tRNA gene sequence 
GGGGAGGTCGCATAGTTGGCCTAGTGCGGCGGTTTGCTAAACCGCTAGGGGAGCAATCCC
CTCGAGGGTTCGAATCCCTCCCTCCCCGCCA
Downstream region at tRNA end position 
cattctccct
Secondary structure (Cloverleaf model)
>WENV170000580	Ser	GCT
                   c      GCCA cattctccct
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G A G G G     C
  G         + | | |                 T T
  C         G T G C
    C T A          G     TAGGGGAGCAATCCCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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