The detailed information of tRNA gene sequence


Sequence ID>WENV170000606
Genome IDAFSR01001037
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 3912
End posion on genome 3988
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gagagcttgt
tRNA gene sequence 
GGAGTTGTAGCTCAGCTGGTTAGAGCGCCGGCCTGTCACGTCGGAGGTCGCGGGTTCGAG
CCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
tacacgttca
Secondary structure (Cloverleaf model)
>WENV170000606	Asp	GTC
                   t      GCCA tacacgttca
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     T - A
                     G - C          C G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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