The detailed information of tRNA gene sequence


Sequence ID>WENV170000610
Genome IDAFSR01001085
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 2686
End posion on genome 2597
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaagggtgct
tRNA gene sequence 
GGTGAGGTGCGAGAGTGGCTGAATCGGTCGGTCTCGAAAACCGATGTACGGGTAACCGTA
CCGTGGGTTCGAATCCCACCCTCACCGCCA
Downstream region at tRNA end position 
gtttcgcaaa
Secondary structure (Cloverleaf model)
>WENV170000610	Ser	CGA
                   t      GCCA gtttcgcaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    C       A T C G
      T G A        G     TGTACGGGTAACCGTACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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